Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_65

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_64: 8432 - HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236, at 148573 to 150625 8432 mRNA_65: 8433 - K12882 NCBP1, CBP80 nuclear cap-binding protein subunit 1, at 150773 to 154577 8433 mRNA_66: 8434 - K15118 SLC25A38 solute carrier family 25, member 38, at 154666 to 156000 8434

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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150,642 - -1.3
150,829 - -0.8
150,968 - -1.0
151,142 - 0.8
152,610 - 8433 mRNA_65 0.48 -0.1
152,771 + 8433 mRNA_65 0.53 -2.7
153,025 + 8433 mRNA_65 0.59 -0.1
153,880 - 8433 mRNA_65 0.82 -1.8
154,127 + 8433 mRNA_65 0.88 0.6
154,469 + -0.5
154,529 + 3.6
154,555 + 3.0
154,618 - 0.7
155,507 + 8434 mRNA_66 0.63 -0.1
155,513 - 8434 mRNA_66 0.63 -0.1
155,516 + 8434 mRNA_66 0.64 -3.2