Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_11

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_10: 8378 - Hypothetical Protein, at 29867 to 30741 8378 mRNA_11: 8379 - Hypothetical Protein, at 31186 to 32050 8379 mRNA_12: 8380 - K12757 MYL12 myosin regulatory light chain 12, at 32509 to 33351 8380

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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30,369 + 8378 mRNA_10 0.57 -0.4
30,766 + -0.7
30,806 + -0.2
30,947 - -0.3
30,953 + 0.2
31,039 - 0.8
31,123 - -2.0
31,252 + -1.2
31,328 + 8379 mRNA_11 0.16 -0.1
31,671 - 8379 mRNA_11 0.56 0.8
31,700 - 8379 mRNA_11 0.59 0.5
31,707 + 8379 mRNA_11 0.60 3.0
31,773 - 8379 mRNA_11 0.68 -2.1
32,006 + 0.4
32,281 + 0.6
32,391 - 0.2
32,394 - 0.2
32,405 - 1.0
32,550 - -1.0
32,551 + 0.4
32,552 - 0.0
32,556 + -0.7
32,558 - 1.2
32,565 - 0.2
32,575 + 0.2
32,579 + -0.5
32,588 - -0.1
32,596 - 8380 mRNA_12 0.10 0.1
32,719 + 8380 mRNA_12 0.25 0.4
32,723 - 8380 mRNA_12 0.25 0.2
32,952 + 8380 mRNA_12 0.53 1.1
32,975 + 8380 mRNA_12 0.55 -1.2
33,006 + 8380 mRNA_12 0.59 0.8