Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_10

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_9: 8377 - Hypothetical Protein, at 28711 to 29599 8377 mRNA_10: 8378 - Hypothetical Protein, at 29867 to 30741 8378 mRNA_11: 8379 - Hypothetical Protein, at 31186 to 32050 8379

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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28,937 + 8377 mRNA_9 0.25 0.9
29,049 - 8377 mRNA_9 0.38 0.8
29,062 - 8377 mRNA_9 0.39 0.4
29,112 + 8377 mRNA_9 0.45 1.2
29,220 - 8377 mRNA_9 0.57 -1.4
29,316 + 8377 mRNA_9 0.68 -0.1
29,501 + 8377 mRNA_9 0.89 -2.2
29,659 + -1.3
29,931 - -0.4
29,938 + -1.2
29,943 - 0.5
30,094 - 8378 mRNA_10 0.26 -0.6
30,106 + 8378 mRNA_10 0.27 1.1
30,136 + 8378 mRNA_10 0.31 0.7
30,170 - 8378 mRNA_10 0.35 3.4
30,178 + 8378 mRNA_10 0.36 -1.2
30,369 + 8378 mRNA_10 0.57 -0.4
30,766 + -0.7
30,806 + -0.2
30,947 - -0.3
30,953 + 0.2
31,039 - 0.8
31,123 - -2.0
31,252 + -1.2
31,328 + 8379 mRNA_11 0.16 -0.1
31,671 - 8379 mRNA_11 0.56 0.8
31,700 - 8379 mRNA_11 0.59 0.5
31,707 + 8379 mRNA_11 0.60 3.0