Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8351

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8350: 16718 - K11397 EAF1, VID21 chromatin modification-related protein VID21, at 1003581 to 1006700 16718 mRNA_8351: 16719 - K14303 NUP160, NUP120 nuclear pore complex protein Nup160, at 1006818 to 1012012 16719 mRNA_8352: 16720 - Hypothetical Protein, at 1012980 to 1013679 16720

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,005,949 + 16718 mRNA_8350 0.76 0.3
1,006,501 - -0.3
1,006,963 - -1.1
1,007,264 - 0.2
1,009,044 + 16719 mRNA_8351 0.43 0.1
1,011,993 + -0.2
1,011,998 - -1.3
1,012,004 + 0.2
1,012,274 + -0.4
1,012,614 - 1.2
1,012,872 - -0.2
1,012,893 - 0.4