Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8318

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8317: 16685 - Hypothetical Protein, at 923361 to 925022 16685 mRNA_8318: 16686 - ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729,SUPERFAMILY--SSF54236, at 925338 to 930210 16686 mRNA_8319: 16687 - HMMPfam-Protein of unknown function (DUF2370)-PF10176, at 930724 to 932736 16687

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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924,969 + -1.4
925,265 - -0.8
925,297 - -0.0
925,883 - 16686 mRNA_8318 0.11 1.0
925,975 + 16686 mRNA_8318 0.13 -0.5
926,766 - 16686 mRNA_8318 0.29 -0.4
926,985 - 16686 mRNA_8318 0.34 -0.0
927,169 + 16686 mRNA_8318 0.38 -1.2
928,242 - 16686 mRNA_8318 0.60 0.5
928,527 + 16686 mRNA_8318 0.65 0.3
928,596 - 16686 mRNA_8318 0.67 -0.7
928,625 + 16686 mRNA_8318 0.67 -0.2
928,843 - 16686 mRNA_8318 0.72 0.4
929,051 + 16686 mRNA_8318 0.76 -0.4
929,990 - -0.0
930,139 - -1.2
930,151 + -0.8
930,426 - 0.5
930,426 - 1.8
930,437 + 0.8
930,450 - 1.1
930,459 + 1.3
930,463 - -0.5
930,750 - -0.7