Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8304

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8303: 16671 - KOG1398 Uncharacterized conserved protein, at 890417 to 892180 16671 mRNA_8304: 16672 - K01336 E3.4.21.48 cerevisin, at 892725 to 894788 16672 mRNA_8305: 16673 - Hypothetical Protein, at 895280 to 896635 16673

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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891,771 - 16671 mRNA_8303 0.77 0.6
891,916 - 16671 mRNA_8303 0.85 -0.6
891,933 + 16671 mRNA_8303 0.86 -1.2
892,209 + -1.2
892,217 + 1.8
892,237 + 1.6
892,339 - 1.6
892,373 - 0.0
892,374 + 0.1
892,384 - 1.9
892,393 - -2.1
892,394 - -1.2
892,395 - -3.5
892,404 - 0.6
892,410 + 2.2
892,499 - 1.9
892,506 + -0.6
892,532 + -2.1
892,556 - -1.9
892,660 - -2.0
892,660 - -1.0
892,661 + 0.6
892,669 - 0.9
892,669 + -0.1
892,671 - 1.9
892,678 - -0.3
892,689 - 0.4
892,802 - 0.1
892,814 + -0.7
892,816 + 1.9
892,826 - -0.1
892,831 - -0.4
892,831 - -0.0
892,864 + -1.3
892,865 + -0.4
892,872 - 0.7
892,954 + 16672 mRNA_8304 0.11 0.9
892,968 - 16672 mRNA_8304 0.12 -0.3
892,996 + 16672 mRNA_8304 0.13 -0.2
892,997 + 16672 mRNA_8304 0.13 -0.2
892,999 + 16672 mRNA_8304 0.13 0.5
893,033 + 16672 mRNA_8304 0.15 0.1
893,123 - 16672 mRNA_8304 0.19 -2.3
893,125 - 16672 mRNA_8304 0.19 -1.7
893,128 + 16672 mRNA_8304 0.20 -0.5
893,133 - 16672 mRNA_8304 0.20 -0.9
893,139 + 16672 mRNA_8304 0.20 -0.2
893,256 - 16672 mRNA_8304 0.26 -1.4
893,271 + 16672 mRNA_8304 0.26 -0.7
893,272 - 16672 mRNA_8304 0.27 2.0
893,284 + 16672 mRNA_8304 0.27 0.9
893,290 + 16672 mRNA_8304 0.27 -0.5
893,302 - 16672 mRNA_8304 0.28 -1.7
893,306 + 16672 mRNA_8304 0.28 0.0
893,306 - 16672 mRNA_8304 0.28 -1.1
893,306 - 16672 mRNA_8304 0.28 0.7
893,309 + 16672 mRNA_8304 0.28 -1.2
893,317 + 16672 mRNA_8304 0.29 -0.0
893,333 + 16672 mRNA_8304 0.29 0.5
893,333 + 16672 mRNA_8304 0.29 -0.5
893,442 - 16672 mRNA_8304 0.35 -3.2
893,464 + 16672 mRNA_8304 0.36 -0.0
893,467 - 16672 mRNA_8304 0.36 -3.3
893,476 + 16672 mRNA_8304 0.36 0.0
893,863 + 16672 mRNA_8304 0.55 -1.0
893,910 + 16672 mRNA_8304 0.57 -2.4
894,050 + 16672 mRNA_8304 0.64 -0.8
894,073 - 16672 mRNA_8304 0.65 -0.2
894,311 - 16672 mRNA_8304 0.77 -2.6
894,761 + -0.3