Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8261

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8260: 16628 - KOG2354 RNA Polymerase C (III) 37 kDa subunit, at 789466 to 790634 16628 mRNA_8261: 16629 - KOG0714 Molecular chaperone (DnaJ superfamily), at 791034 to 792171 16629 mRNA_8262: 16630 - K01958 PC, pyc pyruvate carboxylase, at 792361 to 796882 16630

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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790,707 + -1.7
790,939 - -0.6
790,941 - -0.6
790,953 - 1.9
790,956 - 0.8
790,960 + -0.7
790,962 + -0.1
790,980 - -1.1
790,992 - 2.0
791,097 + 0.3
791,100 - 0.2
791,109 + 0.3
791,123 + -0.2
791,174 - 16629 mRNA_8261 0.12 0.0
791,203 + 16629 mRNA_8261 0.15 -0.1
791,391 + 16629 mRNA_8261 0.31 -0.1
791,441 + 16629 mRNA_8261 0.36 -0.6
791,699 - 16629 mRNA_8261 0.58 -1.9
791,954 - 16629 mRNA_8261 0.81 -0.2
792,126 - 0.1
792,182 + -1.7
792,380 + -2.6