Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8253

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8252: 16620 - HMMPfam-Domain of unknown function (DUF4451)-PF14616, at 770970 to 773846 16620 mRNA_8253: 16621 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 774552 to 775844 16621 mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776228 to 777333 16622

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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774,033 + 1.2
774,607 - 0.3
775,340 + 16621 mRNA_8253 0.61 -0.9
775,470 - 16621 mRNA_8253 0.71 -0.7
775,474 + 16621 mRNA_8253 0.71 0.6
775,606 + 16621 mRNA_8253 0.82 0.3
775,906 - -0.8
775,923 + 0.6
775,938 + 0.1
776,030 + -2.0
776,087 - 0.2
776,092 + -2.0
776,226 + 0.1
776,625 - 16622 mRNA_8254 0.36 -0.1
776,801 + 16622 mRNA_8254 0.52 0.5