Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8236

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8235: 16603 - Hypothetical Protein, at 731881 to 732842 16603 mRNA_8236: 16604 - Interpro Fungal protein of unknown function (DUF1770) 0, at 733012 to 733833 16604 mRNA_8237: 16605 - K04345 PKA protein kinase A, at 734227 to 736264 16605

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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732,013 - 16603 mRNA_8235 0.14 -0.1
732,023 + 16603 mRNA_8235 0.15 1.6
732,477 - 16603 mRNA_8235 0.62 0.4
732,605 + 16603 mRNA_8235 0.75 -2.4
732,617 + 16603 mRNA_8235 0.77 -0.2
732,767 + 2.9
732,768 - -1.3
732,938 + -2.3
733,093 + 1.1
733,232 - 16604 mRNA_8236 0.27 1.1
733,239 - 16604 mRNA_8236 0.28 -0.5
733,659 - 16604 mRNA_8236 0.79 -1.1
733,685 - 16604 mRNA_8236 0.82 -0.3
733,692 - 16604 mRNA_8236 0.83 0.2
733,692 - 16604 mRNA_8236 0.83 -0.6
733,701 + 16604 mRNA_8236 0.84 -0.1
733,725 - 16604 mRNA_8236 0.87 0.7
733,835 + -2.4
733,837 + -0.6
734,250 + -1.8
734,251 - -1.3
734,272 + 2.1
734,426 + 1.6
734,459 + 16605 mRNA_8237 0.11 1.2
734,581 + 16605 mRNA_8237 0.17 0.4
734,656 - 16605 mRNA_8237 0.21 1.3
734,679 + 16605 mRNA_8237 0.22 -0.7