Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8225

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8224: 16592 - K00948 PRPS, prsA ribose-phosphate pyrophosphokinase, at 709564 to 711429 16592 mRNA_8225: 16593 - HMMPfam-DSBA-like thioredoxin domain-PF01323,SUPERFAMILY--SSF52833, at 711695 to 712857 16593

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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711,879 - 16593 mRNA_8225 0.16 2.0
712,125 - 16593 mRNA_8225 0.37 0.3
712,450 - 16593 mRNA_8225 0.65 0.1
712,610 - 16593 mRNA_8225 0.79 0.4
712,872 - -1.0
712,873 + -0.5
712,875 + 2.2
712,878 + 0.3
712,884 + -0.9
712,895 + 0.0
712,980 - -0.1
712,984 + 0.5
713,070 + 1.4
713,077 - 0.6
713,083 - -0.0
713,097 + -0.5
713,125 + -0.8
713,515 - 0.7