Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8212

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8211: 16579 - K02894 RP-L23e, RPL23 large subunit ribosomal protein L23e, at 679410 to 680572 16579 mRNA_8212: 16580 - K17878 NNT1 nicotinamide N-methyltransferase, at 680778 to 681996 16580 mRNA_8213: 16581 - KOG1590 Uncharacterized conserved protein, at 682134 to 683094 16581

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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680,895 - 0.2
680,900 - 16580 mRNA_8212 0.10 -4.0
680,931 + 16580 mRNA_8212 0.13 0.6
681,180 - 16580 mRNA_8212 0.33 2.0
681,482 - 16580 mRNA_8212 0.58 0.4
681,514 + 16580 mRNA_8212 0.60 -0.2
681,782 - 16580 mRNA_8212 0.82 -1.2
681,808 - 16580 mRNA_8212 0.84 0.4
681,812 + 16580 mRNA_8212 0.85 -1.0
681,931 - 0.3
681,934 - 0.6
681,942 - -0.3
682,066 - 1.3
682,067 - 0.5
682,074 - -1.3
682,080 + -0.1
682,085 - -1.2
682,085 + 0.3
682,087 - 0.4
682,109 + 0.1
682,230 - 16581 mRNA_8213 0.10 -0.3
682,230 - 16581 mRNA_8213 0.10 -3.1