Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8186

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8185: 16553 - K02359 EGH egghead protein (zeste-white 4 protein), at 618810 to 622514 16553 mRNA_8186: 16554 - Hypothetical Protein, at 622930 to 623583 16554 mRNA_8187: 16555 - K10949 KDELR ER lumen protein retaining receptor, at 624425 to 625437 16555

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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623,062 + 16554 mRNA_8186 0.20 1.1
623,357 - 16554 mRNA_8186 0.65 -0.1
623,378 + 16554 mRNA_8186 0.69 1.0
623,487 + 16554 mRNA_8186 0.85 -0.5
623,488 - 16554 mRNA_8186 0.85 -1.8
623,496 - 16554 mRNA_8186 0.87 0.2
623,498 - 16554 mRNA_8186 0.87 1.3
623,498 - 16554 mRNA_8186 0.87 0.8
623,498 - 16554 mRNA_8186 0.87 0.1
623,503 - 16554 mRNA_8186 0.88 2.1
623,528 - 0.2
623,530 + 0.1
623,540 - -0.1
623,657 + 1.9
623,669 + 2.3
623,673 - -2.1
623,675 + -0.8
623,682 + -1.2
623,682 - -1.5
623,687 + -0.8
623,689 + -1.0
623,717 + 2.3
623,807 - -0.9
623,851 - -0.4
623,853 - -1.2
623,853 - -1.0
623,857 - 0.7
623,858 + 0.1
623,858 + 0.8
623,862 + -1.1
623,867 + -0.1
623,881 + -0.4
623,954 + 0.2
623,962 - -1.1
623,975 + -0.9
623,990 + 0.2
623,992 + 1.8
623,992 - 1.1
623,998 - -0.1
624,000 - 0.7
624,004 + -0.9
624,013 + 0.6
624,016 - -2.2
624,019 + 2.7
624,025 - -0.7
624,029 - 1.4
624,160 - -0.6
624,164 + -2.0
624,165 - -0.9
624,165 - -0.4
624,170 - -0.4
624,325 + -0.2
624,327 - 2.3
624,457 + -0.7
624,463 - 0.4