Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8167

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8166: 16534 - BLAST receptor-activated Ca2+-permeable cation channel [Aur..., at 571164 to 574503 16534 mRNA_8167: 16535 - K04350 RASGRP1 RAS guanyl-releasing protein 1, at 574672 to 578875 16535

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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573,793 - 16534 mRNA_8166 0.79 -0.0
573,943 + 16534 mRNA_8166 0.83 1.2
574,588 + -1.1
574,592 + 0.9
574,700 - 0.5
574,817 - 0.1
574,887 + -1.7
575,030 + -0.8
575,205 - 16535 mRNA_8167 0.13 -1.0
575,259 - 16535 mRNA_8167 0.14 -1.4
575,470 + 16535 mRNA_8167 0.19 -0.5
575,645 + 16535 mRNA_8167 0.23 0.8
575,723 + 16535 mRNA_8167 0.25 -1.5
575,831 - 16535 mRNA_8167 0.28 0.9
575,931 + 16535 mRNA_8167 0.30 0.9
575,981 - 16535 mRNA_8167 0.31 -0.3
576,033 - 16535 mRNA_8167 0.32 -0.6
576,053 - 16535 mRNA_8167 0.33 -1.0
576,064 + 16535 mRNA_8167 0.33 0.3
576,214 + 16535 mRNA_8167 0.37 0.1
576,463 + 16535 mRNA_8167 0.43 -1.0
576,492 + 16535 mRNA_8167 0.43 -0.9
576,540 - 16535 mRNA_8167 0.44 -2.4
576,579 - 16535 mRNA_8167 0.45 0.9
576,666 - 16535 mRNA_8167 0.47 0.3
576,789 - 16535 mRNA_8167 0.50 -0.0
576,793 - 16535 mRNA_8167 0.50 0.3
577,312 + 16535 mRNA_8167 0.63 1.4
577,390 + 16535 mRNA_8167 0.65 -0.3
577,422 - 16535 mRNA_8167 0.65 1.7
577,623 + 16535 mRNA_8167 0.70 -0.5
578,628 + 2.1
578,756 + 1.1
579,086 + 0.2
579,181 - 0.0
579,182 - 1.6
579,184 + 0.0
579,187 - -3.1
579,199 + 0.3
579,316 - 0.6
579,324 - -0.3
579,341 + -0.2
579,620 - -1.1
579,643 - 0.5
579,779 + -0.5
579,816 + 1.7