Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8133

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8132: 16500 - SUPERFAMILY--SSF52047, at 495876 to 497390 16500 mRNA_8133: 16501 - HMMPfam-Senescence-associated protein-PF06911, at 497849 to 499471 16501 mRNA_8134: 16502 - K17891 ERV2 FAD-linked sulfhydryl oxidase, at 499716 to 500735 16502

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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496,986 + 16500 mRNA_8132 0.73 0.5
497,224 - 16500 mRNA_8132 0.89 0.7
497,333 - -1.9
497,419 + -0.8
497,422 - 1.5
497,431 - -1.3
497,435 + -0.4
497,436 - 0.0
497,446 + 1.0
497,446 - 0.1
497,453 - -0.6
497,579 + 1.0
497,590 + -1.9
497,626 - 0.2
497,705 + 1.1
497,897 - 1.1
497,918 + 1.4
497,932 + -3.2
498,046 + 16501 mRNA_8133 0.12 1.6
498,348 + 16501 mRNA_8133 0.31 0.0
498,792 - 16501 mRNA_8133 0.58 0.7
499,084 + 16501 mRNA_8133 0.76 -1.2
499,624 - 1.1
499,640 - -0.7
500,156 - 16502 mRNA_8134 0.43 0.5
500,237 + 16502 mRNA_8134 0.51 0.7
500,362 + 16502 mRNA_8134 0.63 -0.3
500,373 - 16502 mRNA_8134 0.64 0.2