Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8005

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8004: 16372 - K06648 SWI6 regulatory protein SWI6, at 191300 to 193753 16372 mRNA_8005: 16373 - BLAST alpha- -mannosyltransferase alg11p [Moniliophthor..., at 194577 to 195838 16373

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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193,620 - -0.1
193,818 - 0.3
193,929 - -0.3
193,996 + -0.5
194,080 - -1.4
194,161 + 0.7
194,366 + 0.8
194,476 + -0.0
194,505 + -0.4
194,506 + 1.5
194,631 + -0.4
194,644 - -0.4
194,804 + 16373 mRNA_8005 0.18 1.1
194,809 - 16373 mRNA_8005 0.18 1.6
194,816 + 16373 mRNA_8005 0.19 0.7
194,959 - 16373 mRNA_8005 0.30 -0.2
195,238 - 16373 mRNA_8005 0.52 0.2
195,699 + 16373 mRNA_8005 0.89 -1.8
195,709 + 16373 mRNA_8005 0.90 -0.3
195,710 + 16373 mRNA_8005 0.90 0.5
195,722 + -0.9
195,878 + -0.3
196,004 + -1.4
196,024 + 0.4
196,182 + 0.1
196,262 - 0.2
196,306 - 1.5
196,747 - 0.2
196,755 - 0.8