Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8000

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7999: 16367 - K10994 RAD9A cell cycle checkpoint control protein RAD9A, at 177844 to 179868 16367 mRNA_8000: 16368 - K08991 MUS81 crossover junction endonuclease MUS81, at 180086 to 183760 16368 mRNA_8001: 16369 - K01092 E3.1.3.25, IMPA, suhB myo-inositol-1(or 4)-monophosphatase, at 183994 to 185593 16369

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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179,762 - 0.7
179,880 - -2.0
180,114 - -2.3
180,169 - 0.8
180,226 + 1.4
180,384 - -1.6
180,549 + 16368 mRNA_8000 0.13 -0.6
180,724 + 16368 mRNA_8000 0.17 0.3
180,757 + 16368 mRNA_8000 0.18 -0.8
180,858 - 16368 mRNA_8000 0.21 0.6
180,948 + 16368 mRNA_8000 0.23 -0.2
181,003 - 16368 mRNA_8000 0.25 -1.7
181,106 - 16368 mRNA_8000 0.28 -0.4
181,289 + 16368 mRNA_8000 0.33 0.8
181,417 - 16368 mRNA_8000 0.36 0.4
181,436 + 16368 mRNA_8000 0.37 1.5
181,754 - 16368 mRNA_8000 0.45 1.2
182,022 + 16368 mRNA_8000 0.53 -1.5
182,052 - 16368 mRNA_8000 0.53 1.4
182,088 - 16368 mRNA_8000 0.54 -0.9
182,159 + 16368 mRNA_8000 0.56 1.8
182,455 + 16368 mRNA_8000 0.64 0.3
182,501 - 16368 mRNA_8000 0.66 0.2
182,787 + 16368 mRNA_8000 0.73 0.2
183,029 - 16368 mRNA_8000 0.80 -1.0
183,068 + 16368 mRNA_8000 0.81 1.5
183,072 - 16368 mRNA_8000 0.81 1.5
183,453 + -1.4
183,668 + -0.1
183,933 - -1.0
183,934 + 0.2
184,078 - -1.1
184,215 - 16369 mRNA_8001 0.14 -0.4
184,251 + 16369 mRNA_8001 0.16 -0.1
184,256 - 16369 mRNA_8001 0.16 0.2
184,389 - 16369 mRNA_8001 0.25 0.5
184,432 + 16369 mRNA_8001 0.27 -1.7
184,522 + 16369 mRNA_8001 0.33 0.1