Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7999

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7998: 16366 - KOG3156 Uncharacterized membrane protein, at 176627 to 177709 16366 mRNA_7999: 16367 - K10994 RAD9A cell cycle checkpoint control protein RAD9A, at 177844 to 179868 16367 mRNA_8000: 16368 - K08991 MUS81 crossover junction endonuclease MUS81, at 180086 to 183760 16368

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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176,903 + 16366 mRNA_7998 0.25 -1.1
177,761 - -1.3
177,769 - 1.4
177,779 + 2.4
177,902 + 0.5
177,923 + -1.4
177,925 + 1.6
178,211 + 16367 mRNA_7999 0.18 -0.5
178,929 + 16367 mRNA_7999 0.54 -0.6
179,762 - 0.7
179,880 - -2.0
180,114 - -2.3
180,169 - 0.8
180,226 + 1.4
180,384 - -1.6
180,549 + 16368 mRNA_8000 0.13 -0.6
180,724 + 16368 mRNA_8000 0.17 0.3
180,757 + 16368 mRNA_8000 0.18 -0.8
180,858 - 16368 mRNA_8000 0.21 0.6