Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7975

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7974: 16342 - Hypothetical Protein, at 128673 to 129137 16342 mRNA_7975: 16343 - KOG0762 Mitochondrial carrier protein, at 129725 to 131537 16343 mRNA_7976: 16344 - BLAST carbohydrate-binding module family 13 protein [Schizo..., at 131943 to 133643 16344

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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128,872 - 16342 mRNA_7974 0.43 -0.4
128,877 + 16342 mRNA_7974 0.44 0.4
128,897 - 16342 mRNA_7974 0.48 1.0
129,203 + 0.1
129,230 - -1.5
129,307 - 0.5
129,309 + -0.2
129,309 + -1.9
129,312 - 1.1
129,320 - 0.4
129,338 + 2.0
129,462 - -0.3
129,590 + 0.7
129,638 + 0.2
129,730 - -0.8
129,882 - -0.1
129,895 + 1.0
130,032 - 16343 mRNA_7975 0.17 2.4
130,050 - 16343 mRNA_7975 0.18 -1.0
130,336 + 16343 mRNA_7975 0.34 -1.3
130,859 + 16343 mRNA_7975 0.63 -1.3
130,966 + 16343 mRNA_7975 0.68 -3.4
131,060 + 16343 mRNA_7975 0.74 -1.4
131,181 - 16343 mRNA_7975 0.80 -2.2
131,224 + 16343 mRNA_7975 0.83 -0.3
131,357 - 0.2
131,482 + -0.5
131,482 + -2.9
131,512 + 0.1
131,653 - 0.5
131,958 - 2.3
131,975 + -0.6
132,014 + -0.2
132,117 - 16344 mRNA_7976 0.10 2.5
132,243 - 16344 mRNA_7976 0.18 1.3
132,437 - 16344 mRNA_7976 0.29 -2.0
132,531 + 16344 mRNA_7976 0.35 0.6