Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7970

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7969: 16337 - Hypothetical Protein, at 114657 to 115244 16337 mRNA_7970: 16338 - SUPERFAMILY--SSF144232, at 115514 to 116661 16338 mRNA_7971: 16339 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 116954 to 120210 16339

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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114,530 + 1.3
114,531 + 1.1
114,647 + -0.1
114,651 - -1.4
114,724 - 16337 mRNA_7969 0.11 1.6
114,731 + 16337 mRNA_7969 0.13 -0.8
114,760 - 16337 mRNA_7969 0.18 1.4
114,840 - 16337 mRNA_7969 0.31 -2.6
114,980 - 16337 mRNA_7969 0.55 0.6
114,998 - 16337 mRNA_7969 0.58 0.4
115,000 - 16337 mRNA_7969 0.58 -1.4
115,078 - 16337 mRNA_7969 0.72 0.7
115,087 - 16337 mRNA_7969 0.73 0.2
115,087 + 16337 mRNA_7969 0.73 -0.1
115,090 - 16337 mRNA_7969 0.74 1.2
115,093 - 16337 mRNA_7969 0.74 0.1
115,182 + 16337 mRNA_7969 0.89 1.8
115,234 + 0.0
115,284 - 0.5
115,306 + -0.2
115,309 - -0.2
115,534 + -2.0
115,698 + 16338 mRNA_7970 0.16 -1.5
115,717 - 16338 mRNA_7970 0.18 0.9
115,819 - 16338 mRNA_7970 0.27 0.6
115,839 + 16338 mRNA_7970 0.28 2.6
115,966 - 16338 mRNA_7970 0.39 0.8
116,048 + 16338 mRNA_7970 0.47 0.0
116,051 - 16338 mRNA_7970 0.47 0.4
116,114 + 16338 mRNA_7970 0.52 0.7
116,117 + 16338 mRNA_7970 0.53 0.8
116,135 - 16338 mRNA_7970 0.54 -0.1
116,170 + 16338 mRNA_7970 0.57 -0.3
116,185 - 16338 mRNA_7970 0.58 -1.4
116,267 + 16338 mRNA_7970 0.66 0.8
116,290 - 16338 mRNA_7970 0.68 1.3
116,404 + 16338 mRNA_7970 0.78 0.2
116,430 - 16338 mRNA_7970 0.80 0.5
116,431 + 16338 mRNA_7970 0.80 -0.6
116,437 - 16338 mRNA_7970 0.80 1.9
116,440 - 16338 mRNA_7970 0.81 0.8
116,488 + 16338 mRNA_7970 0.85 -1.3
116,586 - -1.2
116,594 - 1.2
116,736 + 0.9
116,793 + -0.0
116,797 - 2.0
117,105 + -0.3
117,159 + -1.9
117,226 - -0.4
117,229 - -3.1
117,247 - -0.0