Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7951

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7950: 16318 - K04802 PCNA proliferating cell nuclear antigen, at 76989 to 79257 16318 mRNA_7951: 16319 - K09527 DNAJC7 DnaJ homolog subfamily C member 7, at 79808 to 82314 16319 mRNA_7952: 16320 - KOG0627 Heat shock transcription factor, at 82566 to 84687 16320

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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79,287 + -1.0
79,343 - 1.6
79,343 - 0.7
79,348 + 0.6
79,394 - -0.1
79,400 + -0.0
79,405 - -0.8
79,409 + 0.3
79,494 + -0.3
79,679 + 0.0
79,798 + 0.8
79,925 - 2.1
79,931 + -0.5
80,080 + 16319 mRNA_7951 0.11 -0.9
80,523 + 16319 mRNA_7951 0.29 1.2
80,524 - 16319 mRNA_7951 0.29 0.3
80,912 - 16319 mRNA_7951 0.44 -0.9
80,930 - 16319 mRNA_7951 0.45 2.7
80,931 + 16319 mRNA_7951 0.45 -0.3
81,061 - 16319 mRNA_7951 0.50 0.5
81,693 + 16319 mRNA_7951 0.75 0.5
81,831 + 16319 mRNA_7951 0.81 2.6
82,009 + 16319 mRNA_7951 0.88 -0.3
82,091 + 1.0
82,124 + -0.5
82,124 + -1.4
82,228 + -0.8
82,317 - 1.5
82,547 + 1.2
82,592 - 0.2
82,721 - -0.8
83,236 - 16320 mRNA_7952 0.32 -0.6
83,237 + 16320 mRNA_7952 0.32 0.7