Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7929

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7928: 16296 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 39408 to 40571 16296 mRNA_7929: 16297 - K02013 ABC.FEV.A iron complex transport system ATP-binding protein, at 40683 to 43204 16297 mRNA_7930: 16298 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 43652 to 44554 16298

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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39,721 - 16296 mRNA_7928 0.27 -0.2
39,732 - 16296 mRNA_7928 0.28 -2.6
39,791 + 16296 mRNA_7928 0.33 -0.3
39,807 - 16296 mRNA_7928 0.34 0.2
39,890 + 16296 mRNA_7928 0.41 0.6
39,893 - 16296 mRNA_7928 0.42 -1.6
39,893 - 16296 mRNA_7928 0.42 -0.3
39,893 - 16296 mRNA_7928 0.42 -0.5
39,957 + 16296 mRNA_7928 0.47 -0.0
39,992 - 16296 mRNA_7928 0.50 -0.6
40,077 + 16296 mRNA_7928 0.57 1.2
40,129 + 16296 mRNA_7928 0.62 -0.3
40,146 + 16296 mRNA_7928 0.63 0.6
40,315 + 16296 mRNA_7928 0.78 1.1
40,323 - 16296 mRNA_7928 0.79 0.3
40,359 - 16296 mRNA_7928 0.82 0.8
40,400 - 16296 mRNA_7928 0.85 -0.9
40,417 + 16296 mRNA_7928 0.87 0.1
40,475 + 0.8
40,511 + 0.6
40,678 - 1.2
40,707 + -0.1
40,810 - 0.2
40,839 + -2.4
40,981 + 16297 mRNA_7929 0.12 0.2
40,984 - 16297 mRNA_7929 0.12 0.6
40,985 + 16297 mRNA_7929 0.12 2.2
41,215 - 16297 mRNA_7929 0.21 0.0
41,234 - 16297 mRNA_7929 0.22 0.7
41,240 + 16297 mRNA_7929 0.22 2.1
41,243 - 16297 mRNA_7929 0.22 1.0
41,243 - 16297 mRNA_7929 0.22 0.9
41,267 - 16297 mRNA_7929 0.23 -2.1
41,299 + 16297 mRNA_7929 0.24 0.8
41,354 + 16297 mRNA_7929 0.27 -0.4
41,355 - 16297 mRNA_7929 0.27 1.3
41,370 + 16297 mRNA_7929 0.27 0.6
41,486 - 16297 mRNA_7929 0.32 -0.0
41,514 - 16297 mRNA_7929 0.33 0.3
41,661 + 16297 mRNA_7929 0.39 0.0
41,662 - 16297 mRNA_7929 0.39 0.4
41,673 + 16297 mRNA_7929 0.39 0.4
41,692 + 16297 mRNA_7929 0.40 0.8
41,704 + 16297 mRNA_7929 0.40 -1.8
41,716 + 16297 mRNA_7929 0.41 0.0
42,000 - 16297 mRNA_7929 0.52 -0.6
42,251 - 16297 mRNA_7929 0.62 1.6
42,251 + 16297 mRNA_7929 0.62 0.1
42,251 + 16297 mRNA_7929 0.62 1.5
42,254 - 16297 mRNA_7929 0.62 -1.6
42,254 - 16297 mRNA_7929 0.62 1.7
42,290 + 16297 mRNA_7929 0.64 1.0
42,385 - 16297 mRNA_7929 0.67 -0.1
42,397 + 16297 mRNA_7929 0.68 -1.0
42,438 + 16297 mRNA_7929 0.70 3.1
42,572 - 16297 mRNA_7929 0.75 -0.4
42,704 + 16297 mRNA_7929 0.80 1.4
42,819 - 16297 mRNA_7929 0.85 1.0
42,827 - 16297 mRNA_7929 0.85 -1.5
42,849 + 16297 mRNA_7929 0.86 -0.1
42,849 + 16297 mRNA_7929 0.86 1.0
42,863 + 16297 mRNA_7929 0.86 -0.3
43,150 + -0.8
43,229 - -2.1
43,286 + 1.0
43,306 - 0.2
43,447 - -0.3
43,568 - -1.8
43,588 + 0.2
43,588 + -1.2
43,589 - -0.7
43,744 + 16298 mRNA_7930 0.10 -1.1
43,812 - 16298 mRNA_7930 0.18 0.4
43,823 + 16298 mRNA_7930 0.19 0.5
44,011 + 16298 mRNA_7930 0.40 -0.1
44,018 + 16298 mRNA_7930 0.41 -0.1
44,022 - 16298 mRNA_7930 0.41 -1.4
44,038 + 16298 mRNA_7930 0.43 -1.4
44,116 + 16298 mRNA_7930 0.51 0.6
44,171 - 16298 mRNA_7930 0.57 0.4
44,181 + 16298 mRNA_7930 0.59 0.2
44,187 - 16298 mRNA_7930 0.59 -2.1