Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7925

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7924: 16292 - Hypothetical Protein, at 34396 to 34788 16292 mRNA_7925: 16293 - Hypothetical Protein, at 35695 to 36297 16293 mRNA_7926: 16294 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 36892 to 37805 16294

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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34,785 + 1.1
34,795 + 0.3
34,870 + -0.1
34,907 + -0.9
34,918 - 1.6
34,926 - -1.7
35,013 - -0.3
35,089 + 0.4
35,361 + 1.0
35,596 - 0.3
35,861 + 16293 mRNA_7925 0.28 0.3
35,918 + 16293 mRNA_7925 0.37 -0.8
35,934 + 16293 mRNA_7925 0.40 0.5
35,947 - 16293 mRNA_7925 0.42 0.9
36,000 + 16293 mRNA_7925 0.51 -1.0
36,040 + 16293 mRNA_7925 0.57 1.0
36,053 + 16293 mRNA_7925 0.59 3.7
36,200 - 16293 mRNA_7925 0.84 -0.7
36,200 + 16293 mRNA_7925 0.84 4.3
36,533 + -0.6
36,558 + 0.6
36,565 + 0.8
36,802 + -1.0
36,802 + -0.2
36,833 - -0.8
36,845 - 2.8
36,930 - 1.0
36,968 + 0.5
36,979 + -1.1
37,105 + 16294 mRNA_7926 0.23 -0.9
37,155 + 16294 mRNA_7926 0.29 -0.0
37,183 + 16294 mRNA_7926 0.32 0.5
37,238 - 16294 mRNA_7926 0.38 0.1
37,250 - 16294 mRNA_7926 0.39 -0.6
37,269 + 16294 mRNA_7926 0.41 -1.2