Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7918

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7917: 16285 - K18477 RMT2 type IV protein arginine methyltransferase, at 16350 to 18077 16285 mRNA_7918: 16286 - K15523 FN3KRP protein-ribulosamine 3-kinase, at 18272 to 19315 16286

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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17,331 + 16285 mRNA_7917 0.57 -0.6
17,480 - 16285 mRNA_7917 0.65 0.9
17,684 - 16285 mRNA_7917 0.77 0.3
17,789 - 16285 mRNA_7917 0.83 1.1
17,900 + 16285 mRNA_7917 0.90 -3.7
18,055 + -0.9
18,058 - 0.3
18,219 + -0.6
18,322 - 0.1
18,351 - 0.5
18,358 - 2.5
18,417 - 16286 mRNA_7918 0.14 1.7
18,480 - 16286 mRNA_7918 0.20 1.5
18,788 - 16286 mRNA_7918 0.49 1.8
18,791 - 16286 mRNA_7918 0.50 0.6
18,915 + 16286 mRNA_7918 0.62 0.7
18,916 - 16286 mRNA_7918 0.62 0.6
19,036 + 16286 mRNA_7918 0.73 0.4
19,095 + 16286 mRNA_7918 0.79 0.5
19,100 - 16286 mRNA_7918 0.79 -0.3
19,378 - -0.9
19,588 + -1.2
19,654 - 1.7
19,764 - 0.1
19,817 - 1.0
19,831 - 1.3
19,837 + 0.5
19,914 + -0.7
19,934 - 0.4
19,935 + -1.1
20,235 + 0.9
20,291 - 0.3