Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7799

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7798: 16166 - Hypothetical Protein, at 1090877 to 1091572 16166 mRNA_7799: 16167 - KOG1738 Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like, at 1091571 to 1096193 16167 mRNA_7800: 16168 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1096651 to 1099129 16168

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,090,571 + 0.5
1,090,696 - -1.5
1,091,020 + 16166 mRNA_7798 0.21 -0.2
1,091,221 - 16166 mRNA_7798 0.49 -0.3
1,091,271 - 16166 mRNA_7798 0.57 0.4
1,091,272 + 16166 mRNA_7798 0.57 -0.2
1,091,285 + 16166 mRNA_7798 0.59 1.2
1,091,286 - 16166 mRNA_7798 0.59 -0.7
1,091,289 + 16166 mRNA_7798 0.59 0.6
1,091,292 - 16166 mRNA_7798 0.60 1.1
1,091,293 + 16166 mRNA_7798 0.60 -1.7
1,091,298 - 16166 mRNA_7798 0.60 -0.0
1,091,301 - 16166 mRNA_7798 0.61 -1.9
1,091,323 + 16166 mRNA_7798 0.64 -0.1
1,091,444 - 16166 mRNA_7798 0.81 0.7
1,091,478 - 16166 mRNA_7798 0.86 0.7
1,091,582 - 1.0
1,091,746 - 1.9
1,091,760 + -0.3
1,092,063 + 16167 mRNA_7799 0.11 0.5
1,092,514 + 16167 mRNA_7799 0.20 2.2
1,092,772 + 16167 mRNA_7799 0.26 1.2
1,092,893 + 16167 mRNA_7799 0.29 -2.2
1,092,921 - 16167 mRNA_7799 0.29 1.7
1,093,181 - 16167 mRNA_7799 0.35 -1.2
1,093,493 + 16167 mRNA_7799 0.42 -0.1
1,093,505 - 16167 mRNA_7799 0.42 0.2
1,093,523 + 16167 mRNA_7799 0.42 -0.9
1,093,542 + 16167 mRNA_7799 0.43 -1.3
1,093,552 - 16167 mRNA_7799 0.43 1.7
1,093,642 - 16167 mRNA_7799 0.45 -1.0
1,093,942 - 16167 mRNA_7799 0.51 -0.1
1,094,118 + 16167 mRNA_7799 0.55 1.6
1,094,444 + 16167 mRNA_7799 0.62 0.2
1,094,447 - 16167 mRNA_7799 0.62 -0.5
1,094,666 - 16167 mRNA_7799 0.67 0.9
1,094,711 + 16167 mRNA_7799 0.68 -2.3
1,094,714 - 16167 mRNA_7799 0.68 -0.4
1,094,723 - 16167 mRNA_7799 0.68 1.8
1,094,893 + 16167 mRNA_7799 0.72 -1.7
1,095,085 + 16167 mRNA_7799 0.76 -0.3
1,095,646 - 16167 mRNA_7799 0.88 -2.1
1,096,267 - 0.1
1,096,329 - -0.2
1,096,349 + -0.1
1,096,356 + -0.2
1,096,465 + -1.0
1,096,519 + -0.7
1,096,825 + -0.7
1,096,918 - 16168 mRNA_7800 0.11 -0.3
1,096,919 - 16168 mRNA_7800 0.11 -0.2
1,096,922 + 16168 mRNA_7800 0.11 -0.1
1,096,949 - 16168 mRNA_7800 0.12 0.8
1,096,973 + 16168 mRNA_7800 0.13 -0.9