Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7769

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7768: 16136 - SUPERFAMILY--SSF52058, at 1022363 to 1024489 16136 mRNA_7769: 16137 - KOG2504 Monocarboxylate transporter, at 1024603 to 1026390 16137 mRNA_7770: 16138 - K09250 CNBP cellular nucleic acid-binding protein, at 1026696 to 1027876 16138

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,023,767 + 16136 mRNA_7768 0.66 -0.7
1,023,919 - 16136 mRNA_7768 0.73 0.4
1,023,948 + 16136 mRNA_7768 0.75 -0.6
1,023,961 + 16136 mRNA_7768 0.75 1.5
1,023,968 + 16136 mRNA_7768 0.75 -0.9
1,023,976 + 16136 mRNA_7768 0.76 0.7
1,024,077 + 16136 mRNA_7768 0.81 0.4
1,024,082 - 16136 mRNA_7768 0.81 0.4
1,024,102 - 16136 mRNA_7768 0.82 -2.0
1,024,219 + 16136 mRNA_7768 0.87 -1.1
1,024,243 + 16136 mRNA_7768 0.88 0.7
1,024,297 + 0.1
1,024,362 - 0.7
1,024,363 - 0.7
1,024,534 - -0.3
1,024,551 - 0.5
1,024,675 + -0.6
1,024,693 - 0.3
1,024,749 + 1.1
1,024,972 + 16137 mRNA_7769 0.21 0.3
1,025,533 + 16137 mRNA_7769 0.52 0.7
1,025,555 - 16137 mRNA_7769 0.53 0.3
1,025,568 - 16137 mRNA_7769 0.54 0.9
1,026,012 - 16137 mRNA_7769 0.79 -1.1
1,026,021 + 16137 mRNA_7769 0.79 1.2
1,026,126 - 16137 mRNA_7769 0.85 -0.1
1,026,287 - 0.5
1,026,296 + 1.0
1,026,321 + -0.2
1,026,431 - 1.0
1,026,431 - -2.2
1,026,444 - 0.5
1,026,448 + 0.6
1,026,454 - -0.1
1,026,455 + -0.5
1,026,460 - -0.5
1,026,466 + -0.1
1,026,471 + -0.0
1,026,487 + 0.0
1,026,506 - 2.0
1,026,517 + 0.4
1,026,523 - -1.8
1,026,545 + 0.6
1,026,579 + 2.3
1,026,620 + -1.0
1,026,622 - 0.5
1,026,637 + -0.5
1,026,681 + 2.7
1,027,044 + 16138 mRNA_7770 0.29 -0.8