Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7743

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7742: 16110 - KOG3630 Nuclear pore complex, Nup214/CAN component, at 969456 to 971369 16110 mRNA_7743: 16111 - K09569 FKBP2 FK506-binding protein 2, at 971811 to 972530 16111 mRNA_7744: 16112 - Hypothetical Protein, at 972816 to 973446 16112

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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971,261 - 1.5
971,514 + 0.5
971,547 + 1.5
971,670 - -0.1
971,670 + 1.1
971,968 - 16111 mRNA_7743 0.22 -0.7
972,001 + 16111 mRNA_7743 0.26 -0.8
972,094 - 16111 mRNA_7743 0.39 2.6
972,200 - 16111 mRNA_7743 0.54 -0.7
972,201 + 16111 mRNA_7743 0.54 -0.8
972,262 + 16111 mRNA_7743 0.63 0.0
972,370 + 16111 mRNA_7743 0.78 2.0
972,380 - 16111 mRNA_7743 0.79 0.3
972,385 + 16111 mRNA_7743 0.80 1.9
972,401 + 16111 mRNA_7743 0.82 3.0
972,443 + 16111 mRNA_7743 0.88 -0.5
972,513 + 1.5
972,656 - 0.9
972,791 - -1.2
972,802 + -0.3
973,086 - 16112 mRNA_7744 0.43 2.3
973,375 + 16112 mRNA_7744 0.89 0.2
973,447 - -1.0
973,485 - -1.2