Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7726

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7725: 16093 - Hypothetical Protein, at 933861 to 936370 16093 mRNA_7726: 16094 - KOG1231 Proteins containing the FAD binding domain, at 937355 to 939752 16094 mRNA_7727: 16095 - K13354 SLC25A17, PMP34 solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17, at 940127 to 941686 16095

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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936,665 - -0.9
936,669 + -1.1
936,675 - -2.1
936,718 + 1.1
936,718 - 1.5
936,791 + 0.7
936,793 - 0.7
936,795 - 1.9
936,833 - 0.2
936,834 + -1.8
936,948 - 0.3
936,966 - 0.4
936,978 - 0.5
936,987 - 0.2
937,082 + 0.2
937,108 - 1.3
937,111 - 1.2
937,122 - -0.0
937,153 - -0.9
937,257 - 0.2
937,274 - -0.6
937,291 + 0.1
937,312 - -0.9
937,418 - 1.1
937,423 - -0.0
937,536 - 0.1
938,501 + 16094 mRNA_7726 0.48 -0.9
938,578 + 16094 mRNA_7726 0.51 1.6
938,589 + 16094 mRNA_7726 0.51 -0.3
938,715 + 16094 mRNA_7726 0.57 0.4
938,739 - 16094 mRNA_7726 0.58 0.6
939,014 + 16094 mRNA_7726 0.69 0.7
939,135 + 16094 mRNA_7726 0.74 -0.4
939,734 - 0.9
939,884 - -1.2
939,891 - -2.5
939,909 - 0.9
939,909 + -0.4
939,937 + -0.7
939,959 - -1.3
940,191 - 0.3
940,220 + 0.8
940,266 + -1.6
940,268 - 1.5
940,510 - 16095 mRNA_7727 0.25 -0.4
940,531 + 16095 mRNA_7727 0.26 2.9
940,536 - 16095 mRNA_7727 0.26 -0.6
940,544 + 16095 mRNA_7727 0.27 -0.0