Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7723

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7722: 16090 - BLAST iQ calmodulin-binding motif protein [Moesziomyces..., at 928905 to 930722 16090 mRNA_7723: 16091 - HMMPfam-Domain of unknown function (DUF427)-PF04248, at 931116 to 931814 16091 mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932061 to 933452 16092

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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930,117 + 16090 mRNA_7722 0.67 0.6
930,149 + 16090 mRNA_7722 0.68 0.1
930,294 + 16090 mRNA_7722 0.76 -0.1
930,581 - -0.4
930,582 + -0.8
930,680 - 1.0
930,733 - 1.0
930,754 - -0.4
930,758 - 0.4
931,028 - -0.2
931,032 + 0.0
931,144 - 1.3
931,282 + 16091 mRNA_7723 0.24 -0.2
931,309 - 16091 mRNA_7723 0.28 1.9
931,314 + 16091 mRNA_7723 0.28 0.5
931,640 - 16091 mRNA_7723 0.75 0.5
931,754 + 1.1
931,763 + 0.4
931,773 + 1.3
931,810 + 0.8
931,905 - -0.2
931,944 - 1.0
932,104 + -0.3
932,107 - -0.1
932,228 + 16092 mRNA_7724 0.12 0.7
932,263 + 16092 mRNA_7724 0.15 -2.4
932,339 + 16092 mRNA_7724 0.20 0.5
932,377 - 16092 mRNA_7724 0.23 -0.4
932,500 + 16092 mRNA_7724 0.32 0.0
932,542 - 16092 mRNA_7724 0.35 -0.1
932,542 + 16092 mRNA_7724 0.35 -0.9
932,776 - 16092 mRNA_7724 0.51 0.9