Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7716

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7715: 16083 - K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase, at 912208 to 914199 16083 mRNA_7716: 16084 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914377 to 916926 16084 mRNA_7717: 16085 - K17979 MDM31 mitochondrial distribution and morphology protein 31, at 916974 to 919453 16085

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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913,428 + 16083 mRNA_7715 0.61 0.1
913,558 - 16083 mRNA_7715 0.68 -2.6
913,778 - 16083 mRNA_7715 0.79 -0.9
913,848 + 16083 mRNA_7715 0.82 -0.0
913,859 - 16083 mRNA_7715 0.83 0.7
913,997 - 16083 mRNA_7715 0.90 1.0
914,316 - 0.2
914,340 - 1.2
914,461 + -0.8
914,555 + 1.1
914,617 - 2.8
914,621 + 2.7
914,806 + 16084 mRNA_7716 0.17 -0.9
915,005 + 16084 mRNA_7716 0.25 -1.3
915,067 - 16084 mRNA_7716 0.27 0.0
915,177 - 16084 mRNA_7716 0.31 1.1
915,289 + 16084 mRNA_7716 0.36 -0.4
915,323 + 16084 mRNA_7716 0.37 0.8
915,328 - 16084 mRNA_7716 0.37 -0.2
915,654 + 16084 mRNA_7716 0.50 2.4
915,730 - 16084 mRNA_7716 0.53 1.5
916,007 + 16084 mRNA_7716 0.64 0.1
916,079 + 16084 mRNA_7716 0.67 1.3
916,107 + 16084 mRNA_7716 0.68 1.5
916,207 + 16084 mRNA_7716 0.72 -0.5
916,443 - 16084 mRNA_7716 0.81 0.1
916,741 + -0.1
916,751 + 0.5
916,754 - 0.0
916,763 + 0.5
916,803 + 0.4
916,806 + 0.4
916,949 + -0.6
916,976 - -1.2