Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7697

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7696: 16064 - K11269 CTF18, CHL12 chromosome transmission fidelity protein 18, at 858944 to 862198 16064 mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862467 to 863875 16065 mRNA_7698: 16066 - Hypothetical Protein, at 864285 to 865332 16066

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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861,541 + 16064 mRNA_7696 0.80 -0.7
861,592 - 16064 mRNA_7696 0.81 -1.2
862,328 - -0.3
862,369 + 0.3
862,372 - -0.1
862,393 - 1.3
862,603 + -0.9
862,674 - 16065 mRNA_7697 0.15 -0.9
862,835 - 16065 mRNA_7697 0.26 -0.7
862,855 + 16065 mRNA_7697 0.28 -0.0
862,856 - 16065 mRNA_7697 0.28 0.6
862,857 + 16065 mRNA_7697 0.28 0.3
863,128 + 16065 mRNA_7697 0.47 1.6
863,235 - 16065 mRNA_7697 0.55 0.2
863,282 - 16065 mRNA_7697 0.58 -0.2
863,402 - 16065 mRNA_7697 0.66 -0.2
863,578 - 16065 mRNA_7697 0.79 1.5
863,581 + 16065 mRNA_7697 0.79 1.0
863,588 + 16065 mRNA_7697 0.80 0.3
863,664 - 16065 mRNA_7697 0.85 0.3
863,677 + 16065 mRNA_7697 0.86 -1.0
863,709 - 16065 mRNA_7697 0.88 0.0
863,710 + 16065 mRNA_7697 0.88 0.8
863,734 + 16065 mRNA_7697 0.90 -0.6
863,974 + 1.6
863,980 + 1.7
863,984 + 2.1
863,996 - -0.3
864,000 + 0.9
864,004 - 0.3
864,017 + 1.1
864,020 - -0.1
864,027 - 0.8
864,033 + 0.9
864,034 - -0.2
864,036 + 0.2
864,060 - -0.3
864,061 + 1.7
864,062 + -1.9
864,076 - 1.7
864,076 - 0.0
864,083 - -1.6
864,086 - 1.0
864,089 + -1.2
864,089 + -0.3
864,118 - -1.0
864,118 - -1.5
864,118 + -0.4
864,235 + 0.8
864,245 + 0.7
864,318 - 0.2
864,361 - 0.9
864,371 - 1.9
864,382 - -1.0
864,794 - 16066 mRNA_7698 0.49 -0.2