Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7679

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7678: 16046 - K00657 speG diamine N-acetyltransferase, at 821386 to 822078 16046 mRNA_7679: 16047 - K12861 BCAS2 pre-mRNA-splicing factor SPF27, at 822230 to 823111 16047

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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821,351 + 1.7
821,724 + 16046 mRNA_7678 0.49 -1.1
821,824 + 16046 mRNA_7678 0.63 1.7
821,827 + 16046 mRNA_7678 0.64 0.5
821,974 + 16046 mRNA_7678 0.85 0.8
822,093 - -0.2
822,869 - 16047 mRNA_7679 0.72 -0.2
823,043 - -1.3
823,118 - 0.5
823,120 + 0.2
823,130 - 0.6
823,132 - 0.6
823,144 + -0.0
823,150 + 0.7
823,157 + -0.5
823,329 + -1.7
823,476 - -0.9
823,555 - 0.7
823,575 + -1.7
823,712 + 0.7
823,831 - 1.5
823,871 + -0.8
823,957 - -0.2
823,974 - 0.7
823,995 - 0.7
823,996 - 0.3
823,999 - 0.3
824,000 - 2.4
824,004 + -0.2
824,032 + 1.9
824,034 + 0.3
824,034 - 1.4
824,035 + 0.5
824,046 + -2.0
824,050 + 1.2
824,055 + 0.5