Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7636

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7635: 16003 - K02865 RP-L10Ae, RPL10A large subunit ribosomal protein L10Ae, at 735814 to 737148 16003 mRNA_7636: 16004 - Hypothetical Protein, at 738094 to 740941 16004 mRNA_7637: 16005 - K12197 CHMP1, VPS46, DID2 charged multivesicular body protein 1, at 741048 to 741985 16005

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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737,389 + 0.1
737,500 - 1.0
737,509 + -0.0
737,510 - -0.1
737,512 + 1.3
737,525 + -1.6
737,530 - 0.4
737,538 + 1.1
737,671 - 1.0
737,673 + 0.5
737,680 - -0.0
737,687 + -0.6
737,827 - 1.8
737,942 + 1.8
738,084 - -0.5
738,247 - 1.1
738,546 + 16004 mRNA_7636 0.16 1.3
738,933 + 16004 mRNA_7636 0.29 0.3
738,954 + 16004 mRNA_7636 0.30 -0.1
739,020 - 16004 mRNA_7636 0.33 0.4
739,118 + 16004 mRNA_7636 0.36 1.2
739,132 - 16004 mRNA_7636 0.36 1.3
739,577 + 16004 mRNA_7636 0.52 -1.4
739,729 + 16004 mRNA_7636 0.57 2.4
739,808 - 16004 mRNA_7636 0.60 -0.3
739,840 - 16004 mRNA_7636 0.61 0.5
739,858 - 16004 mRNA_7636 0.62 -0.0
739,871 + 16004 mRNA_7636 0.62 -0.7
739,994 + 16004 mRNA_7636 0.67 -0.5
740,253 + 16004 mRNA_7636 0.76 -0.6
740,560 + 16004 mRNA_7636 0.87 1.1
740,857 + -2.7
740,880 - -0.3
741,183 + 16005 mRNA_7637 0.14 -1.6