Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7629

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7628: 15996 - KOG1721 FOG Zn-finger, at 712863 to 715455 15996 mRNA_7629: 15997 - K20474 RINT1, TIP20 RAD50-interacting protein 1, at 715585 to 720215 15997 mRNA_7630: 15998 - K11353 NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13, at 720321 to 721070 15998 mRNA_7631: 15999 - KOG0226 RNA-binding proteins, at 721192 to 722141 15999

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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715,056 + 15996 mRNA_7628 0.85 0.6
715,064 - 15996 mRNA_7628 0.85 -1.8
715,071 + 15996 mRNA_7628 0.85 -1.0
715,507 - 0.1
715,509 - -1.4
715,514 - 0.2
716,244 + 15997 mRNA_7629 0.14 -1.9
716,245 + 15997 mRNA_7629 0.14 -1.6
716,253 + 15997 mRNA_7629 0.14 0.1
718,721 - 15997 mRNA_7629 0.68 0.5
718,890 - 15997 mRNA_7629 0.71 1.3
718,902 - 15997 mRNA_7629 0.72 -2.7
719,046 + 15997 mRNA_7629 0.75 0.1
719,067 + 15997 mRNA_7629 0.75 0.0
719,197 - 15997 mRNA_7629 0.78 -0.8
719,248 + 15997 mRNA_7629 0.79 2.2
719,353 + 15997 mRNA_7629 0.81 -0.3
719,472 - 15997 mRNA_7629 0.84 0.3
719,642 + 15997 mRNA_7629 0.88 -0.1
719,743 + 15997 mRNA_7629 0.90 -1.7
720,237 + -0.6
720,348 - -0.7
721,102 + 1.4
721,113 - 3.0
721,113 - 1.1
721,124 + -1.4
721,133 - 0.4
721,136 + -1.6
721,146 - 1.1