Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7598

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7597: 15965 - Hypothetical Protein, at 648262 to 649679 15965 mRNA_7598: 15966 - K01102 PDP pyruvate dehydrogenase phosphatase, at 649917 to 652257 15966 mRNA_7599: 15967 - K01900 LSC2 succinyl-CoA synthetase beta subunit, at 652530 to 654489 15967

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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649,134 - 15965 mRNA_7597 0.61 -0.2
649,274 - 15965 mRNA_7597 0.71 0.7
649,572 - 0.9
649,578 - 2.0
649,579 + -0.3
649,717 + 0.4
649,730 + 0.3
649,873 + -0.3
649,875 - -0.9
650,023 + 0.4
650,187 + 15966 mRNA_7598 0.12 -1.7
650,308 - 15966 mRNA_7598 0.17 -1.3
650,322 - 15966 mRNA_7598 0.17 -0.8
650,341 + 15966 mRNA_7598 0.18 0.6
650,353 + 15966 mRNA_7598 0.19 0.9
650,622 + 15966 mRNA_7598 0.30 -0.0
650,694 - 15966 mRNA_7598 0.33 -0.0
651,326 - 15966 mRNA_7598 0.60 1.6
651,381 - 15966 mRNA_7598 0.63 -1.1
651,479 + 15966 mRNA_7598 0.67 0.3
651,612 - 15966 mRNA_7598 0.72 -1.4
651,757 + 15966 mRNA_7598 0.79 2.2
651,873 - 15966 mRNA_7598 0.84 2.2
651,910 + 15966 mRNA_7598 0.85 -0.1
651,911 - 15966 mRNA_7598 0.85 0.5
652,050 + -0.8
652,060 + 0.5
652,490 - -0.0