Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7557

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7556: 15924 - K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3, at 554930 to 556179 15924 mRNA_7557: 15925 - Hypothetical Protein, at 556281 to 558919 15925

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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555,421 + 15924 mRNA_7556 0.39 0.0
555,695 - 15924 mRNA_7556 0.61 0.5
556,003 + 15924 mRNA_7556 0.86 -0.6
556,285 + 0.5
556,291 - -0.5
556,299 + -1.6
556,435 - 0.2
556,481 + -0.4
557,157 + 15925 mRNA_7557 0.33 -1.8
557,900 + 15925 mRNA_7557 0.61 0.0
557,915 + 15925 mRNA_7557 0.62 0.8
558,752 - 0.7
559,030 - -0.2
559,220 - 1.4
559,223 - -0.5
559,224 + 1.6
559,225 - -0.4
559,228 - 1.1
559,230 - 1.0
559,231 + -0.8
559,233 - 0.3
559,233 - -0.6
559,235 + -0.7
559,246 - -0.5
559,246 - 0.1
559,253 - -1.1
559,257 - -0.7
559,260 - 0.5
559,265 - 0.6
559,265 + -0.5
559,317 - 0.5
559,318 + 1.1
559,330 - -2.1
559,330 - 0.9
559,337 + 1.3
559,348 - -0.3
559,388 - -0.9
559,396 + 0.4
559,398 + 0.6
559,398 + -0.3
559,446 - -2.3
559,448 + 0.2
559,449 - -2.0
559,450 - 0.4
559,450 - 1.0
559,454 - 0.4
559,468 - -2.3
559,477 + -0.4
559,477 - -0.7
559,482 - -0.4
559,627 + 0.7
559,629 - 0.2
559,633 + -0.3
559,663 - -2.1
559,769 - -2.0