Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7527

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7526: 15894 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 495978 to 498115 15894 mRNA_7527: 15895 - K20031 ZDHHC6 palmitoyltransferase ZDHHC6, at 498360 to 499661 15895 mRNA_7528: 15896 - Hypothetical Protein, at 500481 to 501182 15896

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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497,365 + 15894 mRNA_7526 0.65 -1.6
497,366 - 15894 mRNA_7526 0.65 1.0
497,619 + 15894 mRNA_7526 0.77 1.9
497,704 + 15894 mRNA_7526 0.81 0.6
497,967 + 0.9
497,973 - -1.3
498,094 - -0.0
498,246 - -0.4
498,249 - -0.8
498,276 + 0.4
498,577 - 15895 mRNA_7527 0.17 -0.6
498,591 - 15895 mRNA_7527 0.18 -0.5
498,595 + 15895 mRNA_7527 0.18 -2.2
498,726 - 15895 mRNA_7527 0.28 1.1
498,762 + 15895 mRNA_7527 0.31 1.0
498,901 - 15895 mRNA_7527 0.42 -1.1
499,014 - 15895 mRNA_7527 0.50 -0.2
499,310 - 15895 mRNA_7527 0.73 -2.2
499,313 - 15895 mRNA_7527 0.73 0.9
499,624 + 0.2
499,757 + -3.0
499,883 + 0.3
499,957 + -0.4