Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7507

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7506: 15874 - K15102 SLC25A3, PHC, PIC solute carrier family 25 (mitochondrial phosphate transporter), member 3, at 452663 to 454398 15874 mRNA_7507: 15875 - K17987 NBR1 next to BRCA1 gene 1 protein, at 454869 to 457717 15875 mRNA_7508: 15876 - SUPERFAMILY--SSF52047, at 457973 to 459421 15876

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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454,035 - 15874 mRNA_7506 0.79 0.9
454,039 - 15874 mRNA_7506 0.79 1.0
454,041 - 15874 mRNA_7506 0.79 0.8
454,422 - -0.1
454,440 - -0.8
454,511 + -0.5
454,525 + -0.6
454,528 - -1.6
454,536 + 1.5
454,537 + 0.9
454,665 + 0.2
454,670 + -2.7
454,679 - 0.4
454,842 + 1.6
455,095 - 0.3
455,374 - 15875 mRNA_7507 0.18 -0.8
455,421 - 15875 mRNA_7507 0.19 -1.1
455,578 - 15875 mRNA_7507 0.25 -0.3
456,722 - 15875 mRNA_7507 0.65 0.4
456,892 - 15875 mRNA_7507 0.71 -0.1
457,174 - 15875 mRNA_7507 0.81 -1.5
457,313 - 15875 mRNA_7507 0.86 0.2
457,587 + -1.7
458,645 + 15876 mRNA_7508 0.46 0.6