Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7504

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7503: 15871 - Hypothetical Protein, at 447770 to 449407 15871 mRNA_7504: 15872 - KOG0621 Phospholipid scramblase, at 450090 to 451358 15872 mRNA_7505: 15873 - KOG3292 Predicted membrane protein, at 451426 to 452379 15873

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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449,483 + -0.5
449,505 - 2.7
449,582 + 1.1
449,606 + 0.9
449,918 + -0.2
449,929 + 0.9
450,228 - 15872 mRNA_7504 0.11 -0.7
450,234 + 15872 mRNA_7504 0.11 -0.3
450,326 - 15872 mRNA_7504 0.19 -0.2
450,327 + 15872 mRNA_7504 0.19 0.1
450,359 + 15872 mRNA_7504 0.21 0.7
450,633 - 15872 mRNA_7504 0.43 0.3
451,224 + 15872 mRNA_7504 0.89 -0.4
451,376 - 0.1
451,390 + -0.9
451,392 + 0.2
451,398 + -0.2
451,849 + 15873 mRNA_7505 0.44 2.5