Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7495

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7494: 15862 - K05760 PXN paxillin, at 423513 to 425436 15862 mRNA_7495: 15863 - K10089 M6PR cation-dependent mannose-6-phosphate receptor, at 425956 to 427400 15863 mRNA_7496: 15864 - K03935 NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, at 427998 to 430216 15864

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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425,014 - 15862 mRNA_7494 0.78 0.8
425,014 - 15862 mRNA_7494 0.78 -0.6
425,187 + 15862 mRNA_7494 0.87 1.6
425,203 - 15862 mRNA_7494 0.88 0.2
425,219 - 15862 mRNA_7494 0.89 2.0
425,223 - 15862 mRNA_7494 0.89 0.8
425,330 - -1.8
425,371 + 2.8
425,475 + -1.1
425,491 - 0.8
425,493 - -0.6
425,497 - 0.8
425,634 - -0.6
425,816 + 0.4
426,653 + 15863 mRNA_7495 0.48 0.1
426,709 - 15863 mRNA_7495 0.52 0.0
426,808 - 15863 mRNA_7495 0.59 0.0
427,263 - 1.3
427,276 + 0.0
427,403 - -1.0
427,414 + 1.7
427,414 - -2.6
427,501 - -1.5
427,560 - -1.6
427,563 - 0.7
427,784 + -0.1
427,872 + -1.1
427,877 - 0.2
427,898 + 1.0
428,006 + 0.6
428,012 + 0.2
428,015 + -1.4
428,042 + 0.4