Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7494

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7493: 15861 - K00489 CYP7A1 cholesterol 7alpha-monooxygenase, at 421579 to 423387 15861 mRNA_7494: 15862 - K05760 PXN paxillin, at 423513 to 425436 15862 mRNA_7495: 15863 - K10089 M6PR cation-dependent mannose-6-phosphate receptor, at 425956 to 427400 15863

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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422,574 - 15861 mRNA_7493 0.55 -1.5
422,580 + 15861 mRNA_7493 0.55 -0.2
422,708 + 15861 mRNA_7493 0.62 0.3
423,359 - 0.4
423,359 + 0.2
423,715 + 15862 mRNA_7494 0.10 -1.0
424,015 - 15862 mRNA_7494 0.26 0.4
424,144 - 15862 mRNA_7494 0.33 1.6
424,281 - 15862 mRNA_7494 0.40 -1.3
424,452 + 15862 mRNA_7494 0.49 -0.2
424,584 + 15862 mRNA_7494 0.56 1.8
424,752 - 15862 mRNA_7494 0.64 0.7
425,014 - 15862 mRNA_7494 0.78 0.8
425,014 - 15862 mRNA_7494 0.78 -0.6
425,187 + 15862 mRNA_7494 0.87 1.6
425,203 - 15862 mRNA_7494 0.88 0.2
425,219 - 15862 mRNA_7494 0.89 2.0
425,223 - 15862 mRNA_7494 0.89 0.8
425,330 - -1.8
425,371 + 2.8
425,475 + -1.1
425,491 - 0.8
425,493 - -0.6
425,497 - 0.8
425,634 - -0.6
425,816 + 0.4