Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7462

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7461: 15829 - K08964 mtnB methylthioribulose-1-phosphate dehydratase, at 332906 to 334515 15829 mRNA_7462: 15830 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 334859 to 336377 15830 mRNA_7463: 15831 - Hypothetical Protein, at 337178 to 338673 15831

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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334,195 - 15829 mRNA_7461 0.80 -1.3
334,323 - 15829 mRNA_7461 0.88 3.4
334,501 - -0.9
334,605 + 0.5
334,605 + -1.2
334,608 + -1.6
334,624 + 1.1
334,758 - -0.1
334,765 + -0.7
334,771 - -0.1
335,364 + 15830 mRNA_7462 0.33 0.2
335,382 + 15830 mRNA_7462 0.34 1.2
335,503 - 15830 mRNA_7462 0.42 -1.6
335,504 + 15830 mRNA_7462 0.42 -0.4
335,509 + 15830 mRNA_7462 0.43 -0.1
335,797 - 15830 mRNA_7462 0.62 -0.4
335,801 - 15830 mRNA_7462 0.62 -0.8
335,950 - 15830 mRNA_7462 0.72 0.7
336,094 - 15830 mRNA_7462 0.81 -0.0
336,103 + 15830 mRNA_7462 0.82 -1.0
336,241 - 0.5
336,506 - -1.2
336,523 + -0.0
336,972 - 1.1
336,978 - -0.2
336,982 + 1.2
336,983 + -0.0
336,994 + 0.1
336,994 + 1.6
336,994 + -1.0
337,004 - -0.2
337,007 + -2.6
337,011 + -1.0
337,020 + -0.1
337,048 + -0.4
337,151 - -0.3
337,230 + -0.8