Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7455

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7454: 15822 - K01412 PMPCA, MAS2 mitochondrial-processing peptidase subunit alpha, at 312839 to 314664 15822 mRNA_7455: 15823 - KOG1740 Predicted mitochondrial/chloroplast ribosomal protein S17, at 315184 to 315974 15823 mRNA_7456: 15824 - Hypothetical Protein, at 316330 to 316788 15824

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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314,763 - -0.6
314,806 + -0.1
314,812 + -1.7
314,816 + -0.7
314,824 - -2.5
314,832 + 0.1
314,940 - -0.4
314,956 - -1.3
314,956 + -1.7
314,984 + -1.2
315,097 - -0.9
315,827 + 15823 mRNA_7455 0.81 0.3
315,848 + 15823 mRNA_7455 0.84 -0.3
315,980 + 1.0
316,268 + 0.5
316,398 + 15824 mRNA_7456 0.15 -0.9
316,415 + 15824 mRNA_7456 0.19 -0.5
316,555 + 15824 mRNA_7456 0.49 -1.1
316,560 - 15824 mRNA_7456 0.50 0.0
316,646 - 15824 mRNA_7456 0.69 0.6
316,685 - 15824 mRNA_7456 0.77 0.4
316,686 - 15824 mRNA_7456 0.78 1.0
316,720 - 15824 mRNA_7456 0.85 0.7
316,839 - -1.5
316,859 + -0.9
316,867 + -1.7
316,907 + 0.7
316,930 + 0.6
316,937 - 0.8
316,944 + -0.9
316,959 + 0.8