Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7425

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7423: 15791 - K01568 PDC, pdc pyruvate decarboxylase, at 241820 to 244654 15791 mRNA_7424: 15792 - Hypothetical Protein, at 245039 to 245546 15792 mRNA_7425: 15793 - Hypothetical Protein, at 245564 to 246232 15793 mRNA_7426: 15794 - Hypothetical Protein, at 246763 to 247720 15794

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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244,574 + 0.0
244,588 - 1.8
244,601 - -1.2
244,616 + -0.6
244,619 - 0.3
244,637 - 0.1
244,669 + -0.2
244,687 + 0.8
244,792 - 0.6
244,793 - 0.1
244,794 + -0.5
244,807 + -0.3
244,811 - -0.6
244,833 - 0.1
244,949 + 0.7
244,951 - 1.0
244,959 + -0.1
244,959 - -0.0
245,229 + 15792 mRNA_7424 0.37 -3.7
245,398 - 15792 mRNA_7424 0.71 -0.3
245,711 + 15793 mRNA_7425 0.22 1.3
245,812 + 15793 mRNA_7425 0.37 1.5
245,813 - 15793 mRNA_7425 0.37 -0.5
246,267 + -0.7
246,270 + -0.7
246,282 + -1.2
246,427 + 0.6
246,428 + -2.2
246,550 + 0.3
246,720 + -1.8
246,830 + 1.0
246,861 + 15794 mRNA_7426 0.10 1.3
246,884 - 15794 mRNA_7426 0.13 -1.1
246,902 + 15794 mRNA_7426 0.15 -2.4
247,012 + 15794 mRNA_7426 0.26 0.5
247,021 - 15794 mRNA_7426 0.27 -0.0
247,207 + 15794 mRNA_7426 0.46 1.4