Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7393

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7392: 15760 - Hypothetical Protein, at 171609 to 172297 15760 mRNA_7393: 15761 - HMMPfam-Velvet factor-PF11754, at 172471 to 174336 15761 mRNA_7394: 15762 - KOG0569 Permease of the major facilitator superfamily, at 175289 to 177598 15762

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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171,486 - -0.1
172,071 + 15760 mRNA_7392 0.67 2.4
172,940 - 15761 mRNA_7393 0.25 1.6
173,243 - 15761 mRNA_7393 0.41 1.1
173,678 - 15761 mRNA_7393 0.65 -0.1
173,843 + 15761 mRNA_7393 0.74 1.8
173,843 + 15761 mRNA_7393 0.74 -1.3
174,017 + 15761 mRNA_7393 0.83 -0.7
174,264 - 0.9
174,288 + 2.2
174,408 - -1.6
174,445 + -2.5
174,446 + 0.8
174,569 - -0.5
174,579 - -3.4
174,582 - -3.4
174,584 - -0.5
174,593 + 1.2
174,597 - 0.3
174,601 + 1.8
174,606 - -2.0
174,618 - 0.7
174,622 + 0.4
174,622 + -0.6
174,634 + 1.6
174,636 + -0.1
174,639 - 2.5
174,652 - 0.6
174,662 - 0.6
174,707 + 3.2
174,713 + -0.6
174,730 - 0.2
174,747 - 1.0
174,749 - 1.0
174,812 + 1.1
174,815 + 0.5
174,826 + -0.8
174,852 + -0.6
174,852 + 0.4
174,853 - -0.7
174,861 - 0.5
174,866 - 0.2
174,877 + 0.7
174,888 - -0.2
174,889 - -1.1
174,893 + 0.4
174,893 - 1.1
174,898 + -0.4
174,907 + -0.5
174,911 - -0.1
174,912 - 0.3
174,912 - 1.2
174,914 + -3.6
174,919 + 1.4
174,927 + 0.9
174,939 + -0.9
174,942 + -0.0
175,026 - 1.2
175,055 + 0.2
175,071 - 1.4
175,077 - 1.1
175,079 - -0.7
175,215 - 0.7
175,222 + -1.3