Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7369

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7368: 15736 - K14708 SLC26A11 solute carrier family 26 (sodium-independent sulfate anion transporter), member 11, at 107448 to 110616 15736 mRNA_7369: 15737 - KOG1203 Predicted dehydrogenase, at 111155 to 112314 15737 mRNA_7370: 15738 - HMMPfam-Oligomerisation domain-PF02410, at 112861 to 113422 15738

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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110,272 + 15736 mRNA_7368 0.89 1.9
110,411 - 0.7
110,411 - -0.1
110,573 + 0.3
110,688 + -1.2
110,708 + -0.1
110,727 + 0.7
110,728 - -0.4
110,731 + -0.2
110,743 + -1.2
110,745 - -0.5
110,747 - 0.6
110,750 + 0.6
110,750 - -1.0
110,755 + 0.3
110,757 + -0.5
110,763 + -1.3
110,764 + 0.9
110,851 - 0.6
110,878 - 0.7
110,886 - 1.4
110,892 - 0.3
110,904 + 1.5
110,904 + -0.9
110,905 - -0.6
110,929 - 0.2
110,945 - -1.0
110,949 - -1.3
110,950 + 0.4
110,958 + 0.3
110,979 - -0.6
111,011 - 0.5
111,022 + 1.0
111,023 - -0.0
111,034 + -0.6
111,040 - -0.3
111,178 - -1.6
111,225 + -0.9
111,886 - 15737 mRNA_7369 0.63 -0.1
112,057 - 15737 mRNA_7369 0.78 0.2
112,217 - -0.5
112,221 + -0.6
112,231 + -1.3
112,232 - -0.0
112,234 + -2.1
112,243 + -0.1
112,359 + -1.1
112,364 - -0.8
112,368 + -0.7
112,370 + -0.6
112,374 + -0.5
112,382 + -0.4
112,394 + 0.4
112,399 + 1.4
113,297 - 15738 mRNA_7370 0.78 0.1