Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7361

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7360: 15728 - Hypothetical Protein, at 90512 to 91159 15728 mRNA_7361: 15729 - K14685 SLC40A1, FPN1 solute carrier family 40 (iron-regulated transporter), member 1, at 91590 to 93600 15729 mRNA_7362: 15730 - K13035 NIT4 beta-cyano-L-alanine hydratase/nitrilase, at 93946 to 95192 15730

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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91,027 - 15728 mRNA_7360 0.79 0.7
91,035 - 15728 mRNA_7360 0.81 1.8
91,215 + 0.2
91,478 + 0.9
91,480 - -0.6
91,505 - 1.0
91,635 - -2.1
91,646 - 0.1
91,647 - -1.6
91,648 + -0.8
91,779 - 0.4
91,781 - -1.7
91,838 - 15729 mRNA_7361 0.12 -2.9
91,954 - 15729 mRNA_7361 0.18 2.0
92,090 - 15729 mRNA_7361 0.25 -0.9
92,276 - 15729 mRNA_7361 0.34 0.5
92,534 + 15729 mRNA_7361 0.47 -2.2
93,378 - 15729 mRNA_7361 0.89 -0.9
93,385 + 15729 mRNA_7361 0.89 0.4
93,393 + 15729 mRNA_7361 0.90 -0.6
93,520 - 0.3
93,554 + -1.1
93,687 + -1.3
93,742 - 0.3
93,790 + -0.6
93,813 - -0.3
93,841 + -0.9
93,841 - -0.6
93,859 + -0.4
93,860 + 0.7
93,863 + -0.7
94,066 - 0.2
94,449 + 15730 mRNA_7362 0.40 -1.0
94,582 + 15730 mRNA_7362 0.51 0.3
94,591 + 15730 mRNA_7362 0.52 -2.8