Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7332

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7331: 15699 - KOG1666 V-SNARE, at 24685 to 25773 15699 mRNA_7332: 15700 - K05542 DUS1 tRNA-dihydrouridine synthase 1, at 26472 to 27994 15700 mRNA_7333: 15701 - SUPERFAMILY--SSF52047, at 28402 to 29421 15701

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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25,558 + 15699 mRNA_7331 0.80 -1.8
25,816 - 1.8
25,923 - 1.1
25,931 - -0.6
25,934 + 1.6
26,115 + -2.6
26,257 - 0.1
26,270 - 0.6
26,541 + -0.1
26,542 - -1.9
26,544 - -1.1
26,717 + 15700 mRNA_7332 0.16 -0.8
27,044 + 15700 mRNA_7332 0.38 -2.1
27,116 - 15700 mRNA_7332 0.42 0.6
27,291 - 15700 mRNA_7332 0.54 -0.5
27,576 + 15700 mRNA_7332 0.72 0.5
27,627 - 15700 mRNA_7332 0.76 -0.1
27,726 - 15700 mRNA_7332 0.82 0.9
27,732 + 15700 mRNA_7332 0.83 1.1
27,878 + 0.4
28,011 + -0.3
28,056 - -0.7
28,056 - -0.2
28,314 - -0.2
28,314 - 0.1
28,315 + 2.2
28,319 + 0.8
28,459 + -1.0
28,468 + -0.6
28,471 + -0.1
28,715 - 15701 mRNA_7333 0.31 1.7
28,900 + 15701 mRNA_7333 0.49 0.2
28,901 - 15701 mRNA_7333 0.49 1.9