Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7328

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7327: 15695 - KOG2883 NIPSNAP1 protein, at 15080 to 16504 15695 mRNA_7328: 15696 - KOG1339 Aspartyl protease, at 16802 to 18584 15696

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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16,260 - 15695 mRNA_7327 0.83 -0.8
16,270 - 15695 mRNA_7327 0.84 -0.6
16,314 + 15695 mRNA_7327 0.87 1.1
16,588 + -0.4
16,598 + 2.0
16,769 - -0.7
16,797 + 0.5
17,098 - 15696 mRNA_7328 0.17 0.5
17,165 + 15696 mRNA_7328 0.20 0.7
17,318 + 15696 mRNA_7328 0.29 4.0
17,592 + 15696 mRNA_7328 0.44 1.7
17,597 - 15696 mRNA_7328 0.45 0.3
17,708 + 15696 mRNA_7328 0.51 -1.5
17,731 - 15696 mRNA_7328 0.52 -0.5
17,895 - 15696 mRNA_7328 0.61 -0.5
18,001 + 15696 mRNA_7328 0.67 -0.6
18,174 - 15696 mRNA_7328 0.77 -0.2
18,187 + 15696 mRNA_7328 0.78 0.6
18,193 + 15696 mRNA_7328 0.78 -0.6
18,195 + 15696 mRNA_7328 0.78 0.8
18,290 - 15696 mRNA_7328 0.83 -1.2
18,345 + 15696 mRNA_7328 0.87 -0.9
18,433 - 0.2
18,488 + 0.9
18,600 - 1.6
18,618 - 1.4
18,813 + 0.3
19,048 - 0.1
19,062 - -0.5
19,122 + 0.3
19,182 - -0.7
19,219 - -0.2
19,227 + -0.0
19,227 + 1.9
19,228 - -1.0
19,336 - 0.3
19,338 - 0.7
19,343 + -0.1
19,356 - -1.2
19,369 - 0.7
19,503 + -1.1