Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7295

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7294: 15662 - HMMPfam-F-box-like-PF12937, at 1323105 to 1324702 15662 mRNA_7295: 15663 - K10967 KTR1_3 alpha 1,2-mannosyltransferase, at 1324982 to 1326744 15663 mRNA_7296: 15664 - Hypothetical Protein, at 1327081 to 1328233 15664

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,324,029 - 15662 mRNA_7294 0.58 1.3
1,324,170 - 15662 mRNA_7294 0.67 -0.3
1,324,331 - 15662 mRNA_7294 0.77 -0.2
1,324,335 - 15662 mRNA_7294 0.77 0.4
1,324,335 - 15662 mRNA_7294 0.77 1.6
1,324,455 - 15662 mRNA_7294 0.84 1.2
1,324,456 + 15662 mRNA_7294 0.85 0.1
1,324,469 - 15662 mRNA_7294 0.85 0.3
1,324,579 - 1.3
1,324,612 + 1.7
1,324,618 + -1.0
1,324,639 + 2.0
1,324,802 - 0.2
1,324,915 - 0.0
1,324,925 - 0.7
1,324,941 - -2.1
1,324,981 + -3.3
1,325,036 + -0.7
1,325,038 + -3.4
1,325,043 - -1.3
1,325,098 + 1.3
1,325,115 - 1.3
1,325,238 + 15663 mRNA_7295 0.15 0.2
1,325,243 + 15663 mRNA_7295 0.15 0.7
1,325,258 - 15663 mRNA_7295 0.16 1.3
1,325,536 - 15663 mRNA_7295 0.31 -0.0
1,325,691 - 15663 mRNA_7295 0.40 -2.2
1,325,715 - 15663 mRNA_7295 0.42 -2.0
1,325,715 - 15663 mRNA_7295 0.42 0.2
1,325,717 + 15663 mRNA_7295 0.42 -1.2
1,325,798 + 15663 mRNA_7295 0.46 -0.2
1,325,811 - 15663 mRNA_7295 0.47 0.3
1,326,291 - 15663 mRNA_7295 0.74 0.5
1,326,516 + 15663 mRNA_7295 0.87 0.3
1,326,549 - 15663 mRNA_7295 0.89 0.3
1,326,742 - 1.0
1,326,742 - -0.6
1,326,742 + -0.1
1,326,744 + 3.1
1,326,747 - 0.7
1,326,838 + 0.5
1,327,130 - 2.9
1,327,240 - 15664 mRNA_7296 0.14 1.2
1,327,326 - 15664 mRNA_7296 0.21 0.9
1,327,621 + 15664 mRNA_7296 0.47 1.2
1,327,735 + 15664 mRNA_7296 0.57 0.0