Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7248

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7247: 15615 - Hypothetical Protein, at 1214602 to 1216220 15615 mRNA_7248: 15616 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 1216413 to 1217523 15616 mRNA_7249: 15617 - Hypothetical Protein, at 1217873 to 1218626 15617

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,215,501 + 15615 mRNA_7247 0.56 0.2
1,215,504 - 15615 mRNA_7247 0.56 -1.6
1,215,688 - 15615 mRNA_7247 0.67 -0.1
1,215,722 + 15615 mRNA_7247 0.69 0.3
1,216,116 - -0.0
1,216,138 - 0.3
1,216,239 - -2.6
1,216,523 + -0.1
1,216,568 + 15616 mRNA_7248 0.14 1.8
1,216,651 + 15616 mRNA_7248 0.21 0.0
1,216,867 - 15616 mRNA_7248 0.41 -1.4
1,216,882 - 15616 mRNA_7248 0.42 0.4
1,216,943 - 15616 mRNA_7248 0.48 -0.3
1,216,954 + 15616 mRNA_7248 0.49 -1.9
1,216,955 + 15616 mRNA_7248 0.49 -0.5
1,217,222 + 15616 mRNA_7248 0.73 0.5
1,217,231 + 15616 mRNA_7248 0.74 -0.6
1,217,234 + 15616 mRNA_7248 0.74 -2.0
1,217,237 - 15616 mRNA_7248 0.74 0.5
1,217,324 + 15616 mRNA_7248 0.82 -0.5
1,217,561 + 1.0
1,217,614 + 0.7
1,217,687 - -0.1
1,217,698 - -1.4
1,217,698 - -0.8
1,217,701 - 0.1
1,217,712 - -2.6
1,217,718 + -0.1
1,217,723 + -1.2
1,217,727 + 1.1
1,217,793 + -0.7
1,217,804 + 0.1
1,217,856 + 0.9
1,218,028 + 15617 mRNA_7249 0.21 -0.4
1,218,473 - 15617 mRNA_7249 0.80 0.2